吉林大学学报(理学版)

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非限域单体和水环境下Leu分子的手性转变机制

陈洪斌, 王艳玲   

  1. 吉林医药学院 生物医学工程学院, 吉林 吉林 132013
  • 收稿日期:2016-05-03 出版日期:2017-03-26 发布日期:2017-03-24
  • 通讯作者: 陈洪斌 E-mail:15143215955@163.com

Chiral Transition Mechanism of Leucine Molecule in Non-confined Monomer and Water

CHEN Hongbin, WANG Yanling   

  1. College of Biomedical Engineering, Jilin Medical University, Jilin 132013, Jilin Province, China
  • Received:2016-05-03 Online:2017-03-26 Published:2017-03-24
  • Contact: CHEN Hongbin E-mail:15143215955@163.com

摘要: 基于密度泛函理论B3LYP, 在6-311+G(d,p)基组水平上研究非限域单体和水环境下亮氨酸(Leu)分子的手性转变机制. 通过寻找反应过程中各极值点的结构, 绘制水环境下Leu分子的手性转变路径反应势能面, 并分析各极值点的几何和电子结构特性. 结果表明: 水环境下S型Leu分子手性C原子上的H原子以羧基上的O 原子为桥梁, 转移至手性C原子的另一侧, 实现了从S型到R型Leu分子的手性转变; 水环境下该路径有4个中间体和5个过渡态, 来源于第一个过渡态TS1-S-Leu&1H2O-1的最大反应能垒为57.235 9 kJ/mol, 单体Leu分子手性转变第一个过渡态TS1-S-L eu的最大反应能垒为145.452 7 kJ/mol. 即单个水分子作为H转移桥梁可降低反应能垒.

关键词: 手性, 亮氨酸, 水分子, 过渡态

Abstract: Using density functional theory B3LYP, we investigat ed the chiral transition mechanism of the leucine (Leu) molecule in the non\|confined m onomer and water at the level of 6-311+G(d,p) basis sets. We drawed a Leu mo lecule chiral transition path reaction potential energy surface by finding struc tures of the extreme value points including the transition st ates and intermediates, and analyzed the geometric and electronic structure prop erties of extreme value points. The results show that the hydrogen atom o n the chiral carbon atom of SLeu molecule can transfer to the other si de of the carbon atom via the oxygen atoms of carboxyl atoms as a bridge, and ach ieve the chiral transition of Leu molecule from Stype to Rtype. On t his path there are four intermediates and five transition states. The maximum re action energy barrier is 57235 9 kJ/mol, which comes from the first transition state TS1-S-Leu&1H2O-1. The maximum reaction energy barrier of the first transition state TS1-S-Leu of monomer Leu molecule is 145452 7 kJ/mol. As a result, a single water molecule as the H transfer bridge can reduce the reaction barrier.

Key words: leucine, transition state, chirality, water molecule

中图分类号: 

  • O641