吉林大学学报(理学版)

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双水环境中Phe分子的手性转变机制

祝颖, 曹殿钧, 陈洪斌   

  1. 吉林医药学院 生物医学工程学院, 吉林 吉林 132013
  • 收稿日期:2016-11-28 出版日期:2018-03-26 发布日期:2018-03-27
  • 通讯作者: 陈洪斌 E-mail:15143215955@163.com

Chiral Transition Mechanism of Phenylalanine Molecule in Situation of DualWater

ZHU Ying, CAO Dianjun, CHEN Hongbin   

  1. College of Biomedical Engineering, Jilin Medical University, Jilin 132013, Jilin Province, China
  • Received:2016-11-28 Online:2018-03-26 Published:2018-03-27
  • Contact: CHEN Hongbin E-mail:15143215955@163.com

摘要: 基于密度泛函理论的B3LYP方法, 在6-311+G(2-df-)水平上, 研究双水环境中的苯丙氨酸分子的手性转变过程. 通过寻找过渡态和中间体的反应过程各极值点结构, 绘制苯丙氨酸分子手性转变路径反应势能面, 并分析各极值点的几何和电子结构特性. 结果表明: S-3-Phe&2H2O型苯丙氨酸分子手性C上的H原子以羧基上的O原子为桥梁, 转移至手性C原子的另一侧, 实现从S-3-Phe&2H2O型到R-3-Phe&2H2O型苯丙氨酸分子的手性转变; 该路径有4个中间体和5个过渡态, 最大反应能垒为221.854 8 kJ/mol, 来源于第四个过渡态TS2-S-3-Phe&2H2O.

关键词: 苯丙氨酸, 过渡态, 密度泛函理论, 手性

Abstract: Using the method of density functional theory B3LYP, we investigated the chiral transition process of the phenylalanine molecule in the situation of dualwater at the level of 6-311+G(2-df-). We drew a reaction potential energy surface for chiral transition path by finding the structures of extreme value points including the transition states and intermediates, and analyzed the geometric and electronic structure properties of extreme value points. The results sh
ow that the H atom on the chiral C atom of S-3-Phe&2H2Ophenylalanine molecule can transfer to the other side of the C atom via the O atoms of carboxyl atoms as a bridge, and achieve the chiral transition of phenylalanine molecule from S-3-Phe&2H2Otype to R-3-Phe&2H2Otype. On this path there are four intermediates and five transition states. The maximum reaction energy barrier is 221854 8 kJ/mol, which comes from the fourth transit
ion state TS2-R-3-Phe&2H2O.

Key words: phenylalanine, transition state, chirality, density functional theory

中图分类号: 

  • O641