吉林大学学报(理学版)

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孤立条件下α-丙氨酸分子手性转变机制的密度泛函理论

王佐成1,2, 刘凤阁3, 吕洋4, 赵衍辉1, 于天荣2   

  1. 1. 白城师范学院 物理学院, 吉林 白城 137000; 2. 吉林大学 原子与分子物理研究所, 长春 130012;3. 白城医学高等专科学校 医学二系, 吉林 白城 137000; 4. 白城师范学院 网络管理中心, 吉林 白城 137000
  • 收稿日期:2014-01-10 出版日期:2014-07-26 发布日期:2014-09-26
  • 通讯作者: 王佐成 E-mail:wangzc188@163.com

Chiral Transformaition Mechanism of α-Alanine underIsolated Condition by Density Functional Theory

WANG Zuocheng1,2, LIU Fengge3, LV  Yang4, ZHAO Yanhui1, YU Tianrong2   

  1. 1. College of Physics, Baicheng Normal University, Baicheng 137000, Jilin Province, China;2. Institute of Atomic and Molecular Physics, Jilin University, Changchun 130012, China;3. Department of Medicine Two, Baicheng Medical College, Baicheng 137000, Jilin Province, China;4. Center of Network Management, Baicheng Normal University, Baicheng 137000, Jilin Province, China
  • Received:2014-01-10 Online:2014-07-26 Published:2014-09-26
  • Contact: WANG Zuocheng E-mail:wangzc188@163.com

摘要:

使用基于密度泛函理论B3LYP/6-31+g(d,p)水平上的计算, 研究孤立条件下的α-丙氨酸分子手性转变过程. 通过寻找包括过渡态和中间体的反应过程各极值点结构, 绘制完整的α-丙氨酸分子手性转变路径反应势能面, 并分析各极值点的几何和电子结构特性. 结果表明: S型α-丙氨酸分子手性碳上的氢原子以羧基上的氧原子为桥梁, 转移至手性碳原子的另一侧, 实现了从S型到R型α-丙氨酸分子的手性转变; 该路径有1个中间体和2个过渡态, 最大的反应能垒为326.6 kJ/mol, 来源于第一个过渡态TS1.

关键词: 手性, &alpha, -丙氨酸, 密度泛函理论, 过渡态, 前线分子轨道

Abstract:

Using density functional theory at the level of B3LYP/6-31+g(d,p), we investigated the chiral transition process of the isolated α-alanine molecule. Further more, a complete chiral transition path reaction potential energy surface was drawn by looking for the extreme value point structures including the transition state and intermediate, and the geometry and electronic structure properties of extreme value points were also analyzed. The results show that the hydrogen atom on the chiral carbon atom of Sα-alanine molecule can transfer to the other side of the carbon atom via the oxygen atoms of carboxyl atoms as a bridge, to achieve the chiral transition of α-alanine molecule from Stype to Rtype. On this path there is one intermediate and two transition states. The biggest reaction energy barrier is 326.6 kJ/mol derived from the first transition state TS1.

Key words: chiral, α-alanine, density functional theory (DFT), transition state, frontier molecular orbital

中图分类号: 

  • O641