J4 ›› 2010, Vol. 07 ›› Issue (4): 624-630.

Previous Articles     Next Articles

Using Line Sorting Bayesian Structure Learning Algorithmto Get Gene Regulatory Network

LIU Yuhao1, LIU Guixia1, SU Lanying1, ZHENG Shanhong2, WANG Han1, ZHOU Chunguang1   

  1. 1. College of Computer Science and Technology, Jilin University, Changchun 130012, China;2. School of Computer Science and Engineering, Changchun University of Technology, Changchun 130012, China
  • Received:2009-07-10 Online:2010-07-26 Published:2011-06-14
  • Contact: LIU Guixia E-mail:lgx1034@163.com

Abstract:

This paper presents a new Bayesian network structure learning algorithm based on the idea of a fusion of multiple datasets. This algorithm can reconstruct the network with the help of existing Bayesian network structure learning algorithm, which can deal with the problem effectively that different datasets can’t be merged simply. With the microarray datasets of the Cerevisiae yeast cycle under different conditions, the algorithm can increase the correct rate by about 12%. Experimental results show that this algorithm canimprove the accuracy effectively even if there is few microarray data but too many genes.

Key words: gene regulatory network, Bayesian network, line sorting Bayesian structure learning algorithm, multiple data fusion

CLC Number: 

  • TP399